api nomenclature
Rename some terms:
-
Species -> Organism
-
label
=name
in md format -
shortlabel
=shortname
in md format
-
-
SequenceType
: split into-
SequenceType
is only RNA, DNA or PEP -
add SequenceClass
with Chromosome, rRNA, snRNA, snoRNA, DuplexFragment -
add AnnotationType
with ACA_Box, C_Box, D_Box, H_Box and Other
-
-
Sequence
-
Guide
-
subtype
->subclass
(HACA, CD, ScaRNA, ...) -
add subclass_label
in md format -
Host genes: host_genes
-
-
GuideType
->GuideClass
-
FeatureType
->GraphQLType
-
FeatureSequence
->GenericSequence
-
Isoform
->Isoform implements GuideGroup
-
TableEntry
-
add species: Species
organism: Organism
-
-
Modification
-
result
->symbol
+symbol_label
-
type_str
->type_short_label
+type_label
in md format both -
fix missing interactions: [Interaction!]! @relationship(type: "CAUSE", direction: IN)
-
-
ModifType
-
TwoP_O_Me
->Nm
-
add Ace
-
-
Target
-
add unit
(for LSU/SSU selection in interface)
-
In general: add some field "label"
Questioning:
- Genome
-
version
-
source
-
url
-
Edited by Philippe Bordron